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Type: Article
Published: 2021-10-06
Page range: 265-278
Abstract views: 396
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Does the Garra population (Teleostei: Cyprinidae: Labeoninae) from the Kol River drainage, Persian Gulf basin merit formal description?

Ichthyology and Molecular Systematics Research Laboratory, Zoology Section, Department of Biology, School of Science, Shiraz University, Shiraz, Iran. Department of Biology, College of Sciences, Lorestan University, Khorramabad, Iran.
Ichthyology and Molecular Systematics Research Laboratory, Zoology Section, Department of Biology, School of Science, Shiraz University, Shiraz, Iran.
Pisces Integrative taxonomy DNA barcoding Morphology Species delimitation Middle East

Abstract

Recognizing and defining a species has been a controversial concern for a long time. To define the variation and the limitation between different species, especially closely related taxa in a complex species group, several concepts have been proposed which may lead to different taxonomic decisions. When a taxonomist studies a specific taxon, she/he should adopt a species concept and provide a species limitation to define the studied taxa. Garra population from the Kol River drainage, Persian Gulf basin has already been considered as Garra sp., based on molecular data, and to date no taxonomic decision has been made to provide a specific name for it. The Kol population presents several morphological characters that distinguish it from congeners: fully scaled breast; 7–8 ½ branched dorsal-fin rays; caudal fin with 1617 branched rays and well-developed mental disc with free lateral and posterior margins. It is also distinguished from all other congeners in the Garra rufa group in Iran, by having two fixed, diagnostic nucleotide substitutions in the mtDNA COI barcode region. Furthermore, the Kol population demonstrates some distinct osteological characteristics in comparison to its closest species G. mondica. Based on the integrative molecular phylogenetic and species delimitation analyses, and morphological, osteological and distribution range data presented here, we think that the Kol River population merits formal description and can be considered as a distinct taxonomic unit (species).

 

References

  1. Behrens-Chapuis, S., Herder, F., Esmaeili, H.R., Freyhof, J., Hamidan, N.A., Özuluð, M., Šanda, M.R. & Geiger, M.F. (2015) Adding nuclear rhodopsin data where mitochondrial COI indicates discrepancies—can this marker help to explain conflicts in cyprinids? DNA Barcodes, 3, 187–199. https://doi.org/10.1515/dna-2015-0020
    Bayçelebi, E.S.R.A., Kaya, C., Turan, D. & Freyhof, J. (2021) Garra orontesi, a new species from the Orontes River drainage (Teleostei: Cyprinidae). Zootaxa, 4952, 169–180. https://doi.org/10.11646/zootaxa.4952.1.10
    Bruford, M.W., Hanotte, O., Brokfield, J.F.Y. & Burke, T. (1992) Single–locus and multilocus DNA fingerprinting. In: Hoelzel, A.R. (Ed.), Molecular genetic analysis of populations: a practical approach. Oxford University Press, New York, New York, pp. 225–269.
    Darriba, D., Taboada, G.L., Doallo, R. & Posada, D. (2012) jModelTest 2: more models, new heuristics and parallel computing. Nature Methods, 9 (8), 772. https://doi.org/10.1038/nmeth.2109
    Esmaeili, H.R., Sayyadzadeh, G., Coad, B.W. & Eagderi, S. (2016) Review of the genus Garra Hamilton, 1822 in Iran with description of a new species: a morpho–molecular approach (Teleostei: Cyprinidae). Iranian Journal of Ichthyology, 3 (2), 82–121. https://doi.org/10.22034/iji.v3i2.173
    Geiger, M.F., Herder, F., Monaghan, M.T., Almada, V., Barbieri, R., Bariche, M., Berrebi, P., Bohlen, J., Casal-Lopez, M., Delmastro, G.B., Denys, G.P.J., Dettai, A., Doadrio, I., Kalogianni, E., Kärst, H., Kottelat, M., Kovačić, M., Laporte, M., Lorenzoni, M., Marčić, Z., Özuluð, M., Perdices, A., Perea, S., Persat, H., Porcelotti, S., Puzzi, C., Robalo, J., Šanda, R., Schneider, M., Šlechtová, V., Stoumboudi, M., Walter, S. & Freyhof, J. (2014) Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects barcoding accuracy of its freshwater fishes. Molecular Ecology Resources, 14, 1210–1221. https://doi.org/10.1111/1755-0998.12257
    Hall, T.A. (1999) BioEdit: a user–friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41, 95–98.
    Hamidan, N.A., Geiger, M.F. & Freyhof, J. (2014) Garra jordanica, a new species from the Dead Sea basin with remarks on the relationship of G. ghorensis, G. tibanica and G. rufa (Teleostei: Cyprinidae). Ichthyolology and Exploration of Freshwaters, 25, 223–236.
    Hashemzadeh Segherloo, I., Abdoli, A., Eagderi, S., Esmaeili, H.R., Sayyadzadeh, G., Bernatchez, L., Hallerman, E., Geiger, M.F., Özulug, M., Laroche, J. & Freyhof, J. (2017) Dressing down: convergent reduction of the mental disc in Garra (Teleostei: Cyprinidae) in the Middle East. Hydrobiologia, 785 (1), 47–59. https://doi.org/10.1007/s10750-016-2902-8
    Hashemzadeh Segherloo, I., Bernatchez, L., Golzarianpour, K., Abdoli, A., Primmer, C. & Bakhtiary, M. (2012) Genetic differentiation between two sympatric morphs of the blind Iran cave barb Iranocypris typhlops. Journal of Fish Biology, 81 (5), 1747–1753. https://doi.org/10.1111/j.1095-8649.2012.03389.x
    Hashemzadeh Segherloo, I., Normandeau, E., Benestan, L., Rougeux, C., Coté, G., Moore, J.S., Ghaedrahmati, N., Abdoli, A. & Bernatchez, L. (2018) Genetic and morphological support for possible sympatric origin of fish from subterranean habitats. Scientific Reports, 8, 2909. https://doi.org/10.1038/s41598-018-20666-w
    Huelsenbeck, J.P. & Ronquist, F. (2001) MrBayes: Bayesian inference of phylogeny. Bioinformatics, 17, 754–755. https://doi.org/10.1093/bioinformatics/17.8.754
    Jalili, P., Eagderi, S. (2014) Osteological description of Iran cave barb (Iranocypris typhlops Bruun & Kaiser, 1944). University Journal of Zoology, Rajshahi University, 33, 01–07.
    Kapli, P., Lutteropp, S., Zhang, J., Kobert, K., Pavlidis, P., Stamatakis, A. & Flouri, T. (2017) Multi-rate Poisson Tree Processes for single-locus species delimitation under Maximum Likelihood and Markov Chain Monte Carlo. Bioinformatics, 33 (11), 1630–1638. https://doi.org/10.1093/bioinformatics/btx025
    Kirchner, S., Kruckenhauser, L., Pichler, A., Borkenhagen, K. & Freyhof, J. (2020). Revision of the Garra species of the Hajar Mountains in Oman and the United Arab Emirates with the description of two new species (Teleostei: Cyprinidae). Zootaxa, 4751, 521–545. https://doi.org/10.11646/zootaxa.4751.3.6
    Kottelat, M. & Freyhof, J. (2007) Handbook of European freshwater fishes. Kottelat, Cornol and Freyhof, Berlin, xiv + 646 pp.
    Menon, A.G.K. (1964) Monograph of the Cyprinid fishes of the genus Garra Hamilton. Memoirs of the Indian Museum, 14, 173–260.
    Mousavi-Sabet, H., Vatandoust, S., Fatemi, Y. & Eagderi, S. (2016) Tashan Cave a new cave fish locality for Iran; and Garra tashanensis, a new blind species from the Tigris River drainage (Teleostei: Cyprinidae). FishTaxa, 1 (3), 133–148.
    Mousavi-Sabet, H., Saemi-Komsari, M., Doadrio, I. & Freyhof, J. (2019) Garra roseae, a new species from the Makran region in southern Iran (Teleostei: Cyprinidae). Zootaxa, 4671 (2), 223–239. https://doi.org/10.11646/zootaxa.4671.2.3
    Posada, D. & Crandall, K.A. (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics, 14, 817–818. https://doi.org/10.1093/bioinformatics/14.9.817
    Rojo, L.A. (2009) Dictionary of evolutionary fish osteology. CRC Press, Boca Raton, Florida, 288 pp.
    Sayyadzadeh, G., Esmaeili, H.R., Freyhof, J. (2015) Garra mondica, a new species from the Mond River drainage with remarks on the genus Garra from the Persian Gulf basin in Iran (Teleostei: Cyprinidae). Zootaxa, 4048 (1), 75–89. https://doi.org/10.11646/zootaxa.4048.1.4
    Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688–2690. https://doi.org/10.1093/bioinformatics/btl446
    Sungur, S., Eagderi, S., Jalili, P. & Cicek, E. (2020) Caudal osteology and its application to reconstruct phylogenetic relationship in the genus Garra. Ege Journal of Fisheries and Aquatic Sciences, 37 (3), 245–249.
    Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013) MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution, 30, 2725–2729. https://doi.org/10.1093/molbev/mst197
    Taylor, W.R. & Van Dyke, G.A. (1985) Revised procedures for staining and clearing small fishes and other vertebrates for bone and cartilage study. Cybium, 9, 117–119.
    Ward, R.D., Zemlak, T.S., Innes, H.B., Last, R.P. & Hebert, P.D.N. (2005) DNA barcoding Australia’s fish species. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 360 (1462), 1847–1857. https://doi.org/10.1098/rstb.2005.1716
    Zamani-Faradonbe, M., Keivany, Y., Dorafshan, S. & Zhang, E. (2021) Two new species of Garra (Teleostei: Cyprinidae) from western Iran. Ichthyological Exploration of Freshwaters, 30 (1), 1–22.
    Zhang, J., Kapli, P., Pavlidis, P. & Stamatakis, A. (2013) A general species delimitation method with applications to phylogenetic placements. Bioinformatics, 29 (22), 2869–2876. https://doi.org/10.1093/bioinformatics/btt499

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